Bacillus subtilis EA-CB0575 genome reveals clues for plant growth promotion and potential for sustainable agriculture

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dc.citation.journalTitleFunctional and Integrative Genomics
dc.contributor.authorFranco-Sierra, N.D.
dc.contributor.authorPosada, L.F.
dc.contributor.authorSanta-María, G.
dc.contributor.authorRomero-Tabarez, M.
dc.contributor.authorVillegas-Escobar, V.
dc.contributor.authorÁlvarez, J.C.
dc.contributor.departmentUniversidad EAFIT. Departamento de Cienciasspa
dc.contributor.researchgroupBiodiversidad, Evolución y Conservaciónspa
dc.date.accessioned2021-03-23T19:52:10Z
dc.date.available2021-03-23T19:52:10Z
dc.date.issued2020-01-01
dc.description.abstractBacillus subtilis is a remarkably diverse bacterial species that displays many ecological functions. Given its genomic diversity, the strain Bacillus subtilis EA-CB0575, isolated from the rhizosphere of a banana plant, was sequenced and assembled to determine the genomic potential associated with its plant growth promotion potential. The genome was sequenced by Illumina technology and assembled using Velvet 1.2.10, resulting in a whole genome of 4.09 Mb with 4332 genes. Genes involved in the production of indoles, siderophores, lipopeptides, volatile compounds, phytase, bacilibactin, and nitrogenase were predicted by gene annotation or by metabolic pathway prediction by RAST. These potential traits were determined using in vitro biochemical tests, finding that B. subtilis EA-CB0575 produces two families of lipopeptides (surfactin and fengycin), solubilizes phosphate, fixes nitrogen, and produces indole and siderophores compounds. Finally, strain EA-CB0575 increased 34.60% the total dry weight (TDW) of tomato plants with respect to non-inoculated plants at greenhouse level. These results suggest that the identification of strain-specific genes and predicted metabolic pathways might explain the strain potential to promote plant growth by several mechanisms of action, accelerating the development of plant biostimulants for sustainable agricultural. © 2020, Springer-Verlag GmbH Germany, part of Springer Nature.eng
dc.formatapplication/pdf
dc.identifierhttps://eafit.fundanetsuite.com/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=11925
dc.identifier.doi10.1007/s10142-020-00736-x
dc.identifier.issn1438793X
dc.identifier.issn14387948
dc.identifier.otherWOS;000520908700001
dc.identifier.otherPUBMED;32198678
dc.identifier.otherSCOPUS;2-s2.0-85082849967
dc.identifier.urihttp://hdl.handle.net/10784/26755
dc.language.isoengeng
dc.publisherSpringer
dc.relation.urihttps://www.scopus.com/inward/record.uri?eid=2-s2.0-85082849967&doi=10.1007%2fs10142-020-00736-x&partnerID=40&md5=7657d23759c16ceba797a7042994cb25
dc.rightshttps://v2.sherpa.ac.uk/id/publication/7991
dc.rights.accessrightsinfo:eu-repo/semantics/openAccesseng
dc.rights.localAcceso abiertospa
dc.sourceFUNCTIONAL & INTEGRATIVE GENOMICS
dc.subjectbacilibactineng
dc.subjectfengycineng
dc.subjectindoleeng
dc.subjectlipopeptideeng
dc.subjectmicrobialeng
dc.subjectproductseng
dc.subjectnoteng
dc.subjectclassifiedeng
dc.subjectelsewhereeng
dc.subjectnitrogenaseeng
dc.subjectphytaseeng
dc.subjectsiderophoreeng
dc.subjectsurfactineng
dc.subjectunclassifiedeng
dc.subjectdrugeng
dc.subjectvolatileeng
dc.subjectagent,eng
dc.subjectArticleeng
dc.subjectBacilluseng
dc.subjectsubtiliseng
dc.subjectbacterialeng
dc.subjectgenomeeng
dc.subjectbacterialeng
dc.subjectstraineng
dc.subjectcontrolledeng
dc.subjectstudyeng
dc.subjectdryeng
dc.subjectweighteng
dc.subjectgeneeng
dc.subjectexpressioneng
dc.subjectgeneeng
dc.subjectsequenceeng
dc.subjectgreenhouseeng
dc.subjectineng
dc.subjectvitroeng
dc.subjectstudyeng
dc.subjectnitrogeneng
dc.subjectfixationeng
dc.subjectnonhumaneng
dc.subjectphosphateeng
dc.subjectmetabolismeng
dc.subjectplanteng
dc.subjectgrowtheng
dc.subjectpriorityeng
dc.subjectjournaleng
dc.subjectrhizosphereeng
dc.subjectsustainableeng
dc.subjectagricultureeng
dc.subjecttomatoeng
dc.titleBacillus subtilis EA-CB0575 genome reveals clues for plant growth promotion and potential for sustainable agricultureeng
dc.typepublishedVersioneng
dc.typeinfo:eu-repo/semantics/publishedVersioneng
dc.typearticleeng
dc.typeinfo:eu-repo/semantics/articleeng
dc.type.localArtículospa

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