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    Spatial layout and surface reconstruction from omnidirectional images
    (Institute of Electrical and Electronics Engineers Inc., 2016-01-01) Posada, L.F.; Velasquez-Lopez, A.; Posada, L.F.; Velasquez-Lopez, A.; Universidad EAFIT. Departamento de Ciencias; Ciencias Biológicas y Bioprocesos (CIBIOP)
    This paper presents a spatial layout recovery approach from single omnidirectional images. Vertical structures in the scene are extracted via classification from heterogeneous features computed at the superpixel level. Vertical surfaces are further classified according to their main orientation by fusing oriented line features, floor-wall boundary features and histogram of oriented gradients (HOG) with a Random Forest classifier. Oriented line features are used to build an orientation map that considers the main vanishing points. The floor-wall boundary feature attempts to reconstruct the scene shape as if it were observed from a bird's-eye view. Finally, the HOG descriptors are aggregated per superpixel and summarize the gradient distribution at homogeneous appearance regions. Compared to existing methods in the literature which rely only on corners or lines, our method gains statistical support from multiple cues aggregated per superpixel which provide more robustness against noise, occlusion, and clutter. © 2016 IEEE.
  • Ítem
    HIPAE helicopter-borne in-situ pollution assessment experiment: Plataforma alternativa para la medición de contaminantes en capas verticales
    (Institute of Electrical and Electronics Engineers Inc., 2019-01-01) Botero A.Y.; Florez J.; Duque J.F.; Rendon A.; Lopez-Restrepo S.; Pinel N.; Quintero O.L.; Oquinte1@eafit.edu.co; Rodriguez J.S.; Galvez J.; Lopera D.V.; Montilla E.; Marulanda J.I.; Isaza C.; Lainez M.L.A.; Zapata A.F.; Botero A.Y.; Florez J.; Duque J.F.; Rendon A.; Lopez-Restrepo S.; Pinel N.; Quintero O.L.; Oquinte1@eafit.edu.co; Rodriguez J.S.; Galvez J.; Lopera D.V.; Montilla E.; Marulanda J.I.; Isaza C.; Lainez M.L.A.; Zapata A.F.; Universidad EAFIT. Departamento de Ciencias; Ciencias Biológicas y Bioprocesos (CIBIOP)
  • Ítem
    Standardized Approaches for Assessing Metagenomic Contig Binning Performance from Barnes-Hut t-Stochastic Neighbor Embeddings
    (SPRINGER, 2020-01-01) Ceballos J.; Ariza-Jiménez L.; Pinel N.; Ceballos J.; Ariza-Jiménez L.; Pinel N.; Universidad EAFIT. Departamento de Ciencias; Ciencias Biológicas y Bioprocesos (CIBIOP)
    The performance of unsupervised methods for metagenomic binning is often assessed using simulated microbial communities. The lack of well-characterized evaluation protocols and approaches to community construction cognizant of biological realities impedes the rigorous assessment and standardization of the binning process. This work attempted to standardize performance evaluation using benchmark communities constructed according to the genome similarity metric Average Amino Acid identity. This approach allowed us to extend and deepen our previous research on the unsupervised binning of metagenomic sequence fragments based on low-dimensional embeddings of pentamer frequency profiles. Experimental results evidenced our method’s potential for the binning of metagenomic contigs to become an alternative to state-of-the-art methods such as MetaCluster 3.0. © 2020, Springer Nature Switzerland AG.